Screenshots

Overview

wizard
The Wizard window opens immediately upon launching jMRUI and allows users to quickly select the tasks they want to perform.

 Preprocessing

The software provides several preprocessing algorithms.
The software provides several preprocessing algorithms.
svd1
jMRUI provides interactive algorithms for water suppression

Quantitation

amares1
AMARES – peak selection – prior knowledge and overall phases window
Picture1
AMARES: 31P muscle kinetic effort, 2 T, peak picking.

 

quest1
Main QUEST window
jMRUI v. 5.0 - Human brain MRSI quantitation
Quantitation of human brain MRSI with QUEST. The spectra were acquired at 1.5 T with TE of 150 ms. Due to the long TE, this data set contains only a few peaks, which were fitted in time-domain with QUEST using a simulated basis set with 3 metabolites: N-acetylaspartate, creatine and choline.

 

 Simulator (NMRScopeB)

nmrscopeb-face
NMRScopeB, user interface.
Picture2
Metabolite basis set simulated with jMRUI’s simulator plug-in NMRScopeB.

 

Spectroscopic imaging simulation. Lactate, spherical sample with a cuboid dent, 1-pulse excitation.
Spectroscopic imaging simulation. Lactate, spherical sample with a cuboid dent, 1-pulse excitation.
1 step in 2D ISIS volume selection with a hyperbolic secant AFP pulses.
Voxel selection profile in 2D ISIS with hyperbolic secant AFP pulses. Simulated in NMRScopeB.

 Clinical plugins

Clinical plugins - computation and generation of absolute concentrations of selected metabolites.
Clinical plugin – computation and generation of absolute concentrations report of selected metabolites.
Clinical plugins - support for database of normal values. Generation of reports with reference
Clinical plugin – support for database of normal values. Generation of reports with reference

 

New jMRUI Clinical Viewer plug-in for MRS and MRSI: Cho/Cr metabolite map in a GBM-patient brain (quantified with QUEST), 1.5T, TE = 135 ms.
New jMRUI Clinical Viewer plug-in for MRS and MRSI:
Cho/Cr metabolite map in a GBM-patient brain (quantified with QUEST), 1.5T, TE = 135 ms. (from version 6.0)
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